SMTL ID : 5k7g.1 (3 other biounits)

IRAK4 in complex with AZ3862

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: G.36, G.37, F.38, K.154 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.37, A:D.152 Water bridges: A:F.38 Salt bridges: A:K.154 SO4.2: 3 residues within 4Å: Chain A: T.206, K.208, K.282 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.184, A:T.206 Salt bridges: A:K.208, A:K.282

1 x 6R0: (3~{a}~{S},7~{a}~{R})-1-methyl-5-[4-[[5-(oxan-4-yl)-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl]amino]cyclohexyl]-3,3~{a},4,6,7,7~{a}-hexahydropyrrolo[3,2-c]pyridin-2-one(Non-covalent)

6R0.3: 13 residues within 4Å: Chain A: M.33, G.34, V.41, A.52, K.54, V.87, Y.103, V.104, Y.105, M.106, D.113, L.118, L.159 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.41, A:A.52, A:Y.103, A:L.118, A:L.159 Hydrogen bonds: A:K.54, A:V.104, A:M.106 Salt bridges: A:D.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scott, J.S. et al., Discovery and Optimization of Pyrrolopyrimidine Inhibitors of Interleukin-1 Receptor Associated Kinase 4 (IRAK4) for the Treatment of Mutant MYD88L265P Diffuse Large B-Cell Lymphoma. J. Med. Chem. (2017)

Release Date

2017-12-06

Peptides

Interleukin-1 receptor-associated kinase 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Interleukin-1 receptor-associated kinase 4

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