SMTL ID : 5kef.1

Structure of hypothetical Staphylococcus protein SA0856 with zinc

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: H.59, E.61 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.59 ZN.2: 1 residues within 4Å: Chain A: H.144 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.144 ZN.3: 2 residues within 4Å: Chain B: H.59, E.61 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:H.59, B:E.61 ZN.4: 2 residues within 4Å: Chain B: H.144 Ligands: ACT.5 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:H.144

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.5: 4 residues within 4Å: Chain A: H.59 Chain B: M.130, H.144 Ligands: ZN.4 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Water bridges: A:H.59 Salt bridges: A:H.59, B:H.144

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chirgadze, Y.N. et al., Crystal structure of Staphylococcus aureus Zn-glyoxalase I: new subfamily of glyoxalase I family. J. Biomol. Struct. Dyn. (2018)

Release Date

2017-01-18

Peptides

PhnB protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PhnB protein