- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x PA1- GCS: 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-alpha-D-glucopyranose(Non-covalent)
- 2 x ACO: ACETYL COENZYME *A(Non-covalent)
ACO.3: 23 residues within 4Å:- Chain A: I.78, S.80, I.81, I.82, V.83, R.88, H.89, Q.90, G.91, I.92, G.93, T.94, C.114, G.115, P.126, C.129, P.131, S.132, E.134, F.135, V.138
- Chain B: N.295
- Ligands: EDO.6
19 PLIP interactions:17 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:I.81, A:I.81, A:V.83, A:R.88, A:H.89, A:Q.90, A:G.91, A:I.92, A:G.93, A:T.94, A:S.132, B:N.295, B:N.295
- Water bridges: A:F.87, A:H.89, A:S.132, A:E.134
- Salt bridges: A:H.89
- pi-Cation interactions: A:H.89
ACO.8: 20 residues within 4Å:- Chain B: I.78, S.80, I.81, I.82, V.83, R.88, H.89, Q.90, G.91, I.92, G.93, T.94, G.115, P.126, C.129, S.132, F.135, F.136, V.138, R.139
21 PLIP interactions:21 interactions with chain B- Hydrophobic interactions: B:F.135
- Hydrogen bonds: B:I.81, B:I.81, B:V.83, B:R.88, B:H.89, B:Q.90, B:G.91, B:I.92, B:G.93, B:T.94, B:S.132
- Water bridges: B:F.87, B:Q.90, B:T.94, B:T.94, B:T.94, B:T.94, B:S.132, B:E.134
- Salt bridges: B:R.139
- 3 x COA: COENZYME A(Non-covalent)
COA.4: 5 residues within 4Å:- Chain A: E.5, T.6, Y.7, D.8, F.48
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:Y.7, A:D.8, A:D.8
- Water bridges: A:T.6, A:Y.7
- pi-Stacking: A:Y.7, A:Y.7
COA.5: 11 residues within 4Å:- Chain A: F.189, W.193, G.254, I.255, R.260, K.261, Q.262, G.263, L.264, G.265, R.266
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:W.193
- Hydrogen bonds: A:I.255, A:R.260, A:K.261, A:G.263, A:G.263, A:L.264, A:G.265, A:R.266
- Water bridges: A:Q.262
COA.9: 12 residues within 4Å:- Chain B: W.193, G.254, I.255, R.260, K.261, Q.262, G.263, L.264, G.265, R.266, I.293, F.296
11 PLIP interactions:11 interactions with chain B- Hydrophobic interactions: B:I.255, B:I.293
- Hydrogen bonds: B:I.255, B:K.261, B:Q.262, B:G.263, B:G.263, B:L.264, B:G.265, B:R.266
- Water bridges: B:Y.259
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.6: 8 residues within 4Å:- Chain A: N.19, I.85, R.88
- Chain B: G.298, N.301, F.302, M.303
- Ligands: ACO.3
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:N.19, A:R.88, A:R.88, B:G.298
EDO.7: 5 residues within 4Å:- Chain A: L.127, Y.146, Y.148
- Chain B: L.127, Y.146
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:Y.148, A:Y.148, B:Y.148
- 1 x MPO: 3[N-MORPHOLINO]PROPANE SULFONIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dopkins, B.J. et al., Structural Studies on a Glucosamine/Glucosaminide N-Acetyltransferase. Biochemistry (2016)
- Release Date
- 2016-07-06
- Peptides
- Predicted acetyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x PA1- GCS: 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-alpha-D-glucopyranose(Non-covalent)
- 2 x ACO: ACETYL COENZYME *A(Non-covalent)
- 3 x COA: COENZYME A(Non-covalent)
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x MPO: 3[N-MORPHOLINO]PROPANE SULFONIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dopkins, B.J. et al., Structural Studies on a Glucosamine/Glucosaminide N-Acetyltransferase. Biochemistry (2016)
- Release Date
- 2016-07-06
- Peptides
- Predicted acetyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B