SMTL ID : 5kos.2 (2 other biounits)

Discovery of TAK-272: A Novel, Potent and Orally Active Renin In-hibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.41 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.1: 4 residues within 4Å: Chain A: N.72, T.74, L.89, M.104 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.72

1 x 6VS: 2-~{tert}-butyl-4-(3-methoxypropylamino)-~{N}-(2-methylpropyl)-~{N}-[(3~{S},5~{R})-5-morpholin-4-ylcarbonylpiperidin-3-yl]pyrimidine-5-carboxamide(Non-covalent)

6VS.2: 23 residues within 4Å: Chain A: T.15, Q.16, Y.17, V.33, D.35, G.37, Y.80, S.81, T.82, P.115, F.116, L.118, A.119, F.121, V.124, Y.159, L.221, D.223, T.224, G.225, A.226, I.302, T.306 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Q.16, A:P.115, A:F.116, A:L.118, A:L.118 Hydrogen bonds: A:Y.17, A:S.81, A:D.223, A:G.225 Water bridges: A:S.227, A:S.227

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 5 residues within 4Å: Chain A: N.191, L.192, R.327, N.328, N.329 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.192 Water bridges: A:R.326, A:R.327

2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4: 3 residues within 4Å: Chain A: E.273, Y.274, F.320 1 PLIP interactions: 1 interactions with chain A Water bridges: A:T.275 DMS.5: 3 residues within 4Å: Chain A: S.6, V.7, I.8 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.8 Salt bridges: A:E.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Imaeda, Y. et al., Discovery of TAK-272: A Novel, Potent, and Orally Active Renin Inhibitor. Acs Med.Chem.Lett. (2016)

Release Date

2016-11-16

Peptides

Renin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Renin

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