SMTL ID : 5ktw.2 (2 other biounits)

CREBBP bromodomain in complex with Cpd 44 (3-((5-acetyl-1-(cyclopropylmethyl)-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-3-yl)amino)-N-isopropylbenzamide)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.09 Å

Oligo State

monomer

Ligands

1 x 6XG: 3-[[1-(cyclopropylmethyl)-5-ethanoyl-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridin-3-yl]amino]-~{N}-propan-2-yl-benzamide(Non-covalent)

6XG.1: 11 residues within 4Å: Chain A: P.24, L.27, P.28, F.29, V.33, L.38, I.40, N.86, R.91, V.92, F.95 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:P.24, A:L.27, A:L.27, A:P.28, A:P.28, A:F.29, A:V.33, A:L.38, A:I.40, A:V.92, A:F.95 Hydrogen bonds: A:P.28, A:N.86, A:R.91

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: V.33, D.34, P.35, F.44 1 PLIP interactions: 1 interactions with chain A Water bridges: A:D.34 EDO.3: 2 residues within 4Å: Chain A: R.91, K.94 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.94 Water bridges: A:T.89, A:T.89, A:K.94 EDO.4: 4 residues within 4Å: Chain A: E.25, K.94, F.95, K.98 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.25, A:E.25 Water bridges: A:K.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crawford, T.D. et al., Discovery of a Potent and Selective in Vivo Probe (GNE-272) for the Bromodomains of CBP/EP300. J. Med. Chem. (2016)

Release Date

2016-11-02

Peptides

CREB-binding protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

CREB-binding protein

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