- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 2 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 2 residues within 4Å:- Chain A: T.116
- Ligands: GNP.1
4 PLIP interactions:1 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:T.116, H2O.2, H2O.2, H2O.3
MG.11: 3 residues within 4Å:- Chain B: T.115, R.141
- Ligands: GNP.10
4 PLIP interactions:1 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:T.115, H2O.9, H2O.9, H2O.10
- 1 x G: GUANOSINE-5'-MONOPHOSPHATE(Non-covalent)
- 7 x GOL: GLYCEROL(Non-functional Binders)
GOL.4: 5 residues within 4Å:- Chain A: N.46, K.48, L.49, S.52, Y.233
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:S.52, A:S.52, A:Y.233
GOL.5: 7 residues within 4Å:- Chain A: M.253, I.276, F.288, N.289, R.292, F.293, R.296
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:N.289, A:N.289, A:R.292, A:R.296
- Water bridges: A:E.286
GOL.6: 6 residues within 4Å:- Chain A: L.152, Q.155, I.282
- Chain B: F.140, R.141, A.142
3 PLIP interactions:1 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:A.142, A:Q.155, A:I.282
GOL.12: 5 residues within 4Å:- Chain B: Y.150, K.154, Q.277, N.278, Y.279
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Y.279
- Water bridges: B:D.280
GOL.13: 8 residues within 4Å:- Chain A: Q.151
- Chain B: T.139, F.140, R.141, A.143, A.144, Q.145, E.146
6 PLIP interactions:1 interactions with chain A, 5 interactions with chain B- Water bridges: A:Q.151, B:F.140
- Hydrogen bonds: B:A.144, B:Q.145, B:E.146, B:E.146
GOL.14: 5 residues within 4Å:- Chain B: K.100, N.129, S.131, N.183, D.185
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:K.100, B:S.131, B:S.131
GOL.15: 6 residues within 4Å:- Chain B: K.206, L.209, R.210, R.217, V.240
- Ligands: SO4.17
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:K.206, B:R.210, B:R.217, B:R.217
- 5 x SO4: SULFATE ION(Non-functional Binders)
SO4.7: 3 residues within 4Å:- Chain A: Y.198, G.199, R.238
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:G.199
- Salt bridges: A:R.238
SO4.8: 5 residues within 4Å:- Chain A: Y.198, K.231, D.234, R.238
- Chain B: D.253
6 PLIP interactions:5 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:Y.198, A:Y.198, B:D.253
- Water bridges: A:D.234
- Salt bridges: A:K.231, A:R.238
SO4.9: 3 residues within 4Å:- Chain A: Y.146, D.147, P.164
2 PLIP interactions:2 interactions with chain A- Water bridges: A:D.147, A:D.147
SO4.16: 4 residues within 4Å:- Chain B: L.159, I.160, R.161, G.162
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:L.159, B:R.161, B:G.162
SO4.17: 2 residues within 4Å:- Chain B: R.210
- Ligands: GOL.15
3 PLIP interactions:3 interactions with chain B- Water bridges: B:K.206
- Salt bridges: B:K.206, B:R.210
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wild, K. et al., Structural Basis for Conserved Regulation and Adaptation of the Signal Recognition Particle Targeting Complex. J.Mol.Biol. (2016)
- Release Date
- 2016-06-08
- Peptides
- Signal recognition particle 54 kDa protein: A
Signal recognition particle receptor FtsY: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 2 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 1 x G: GUANOSINE-5'-MONOPHOSPHATE(Non-covalent)
- 7 x GOL: GLYCEROL(Non-functional Binders)
- 5 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wild, K. et al., Structural Basis for Conserved Regulation and Adaptation of the Signal Recognition Particle Targeting Complex. J.Mol.Biol. (2016)
- Release Date
- 2016-06-08
- Peptides
- Signal recognition particle 54 kDa protein: A
Signal recognition particle receptor FtsY: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B