SMTL ID : 5l96.1

Crystal Structure of BAZ2B bromodomain in complex with 3-amino-2-methylpyridine derivative 1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x 6RZ: 2-methyl-~{N}-[(2~{R})-1-methylsulfonylpropan-2-yl]pyridin-3-amine(Non-covalent)

6RZ.1: 11 residues within 4Å: Chain A: P.33, F.34, V.38, N.39, L.42, V.43, Y.46, F.88, N.89, I.95 Ligands: EDO.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.34, A:V.38, A:I.95, A:I.95 Hydrogen bonds: A:P.33, A:N.89

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: L.42, V.43, I.95 Ligands: 6RZ.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Marchand, J.R. et al., Derivatives of 3-Amino-2-methylpyridine as BAZ2B Bromodomain Ligands: In Silico Discovery and in Crystallo Validation. J. Med. Chem. (2016)

Release Date

2016-10-26

Peptides

Bromodomain adjacent to zinc finger domain protein 2B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2B

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