SMTL ID : 5l9w.1 (1 other biounit)

Crystal structure of the Apc core complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-oligomer

Ligands

3 x HG: MERCURY (II) ION(Non-covalent)

HG.1: 4 residues within 4Å: Chain A: D.65, H.123, D.126, H.148 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.65, A:H.123, A:D.126, A:H.148, H2O.1 HG.2: 2 residues within 4Å: Chain A: C.82, I.331 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.82, H2O.1 HG.5: 5 residues within 4Å: Chain B: C.22, C.25, C.75, C.78, R.80 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.22, B:C.25, B:C.75, B:C.78

1 x K: POTASSIUM ION(Non-covalent)

K.3: 6 residues within 4Å: Chain A: M.362, T.365, N.394, D.500, N.501, T.506 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.500

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.4: 6 residues within 4Å: Chain A: P.201, S.202, Q.404, G.408, S.409, S.410 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.202, A:S.202, A:Q.404, A:S.410

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weidenweber, S. et al., Structure of the acetophenone carboxylase core complex: prototype of a new class of ATP-dependent carboxylases/hydrolases. Sci Rep (2017)

Release Date

2017-01-18

Peptides

Acetophenone carboxylase delta subunit: A
Acetophenone carboxylase beta subunit: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Acetophenone carboxylase delta subunit

Acetophenone carboxylase beta subunit