- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.61 Å
- Oligo State
- homo-12-mer
- Ligands
- 12 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 24 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 6 residues within 4Å:- Chain A: D.40, M.59, K.97, F.249, V.250, G.251
Ligand excluded by PLIPGOL.3: 4 residues within 4Å:- Chain A: D.196
- Chain C: Q.242
- Chain D: F.103, N.136
Ligand excluded by PLIPGOL.5: 6 residues within 4Å:- Chain B: D.40, M.59, K.97, F.249, V.250, G.251
Ligand excluded by PLIPGOL.6: 4 residues within 4Å:- Chain B: D.196
- Chain C: F.103, N.136
- Chain L: Q.242
Ligand excluded by PLIPGOL.8: 4 residues within 4Å:- Chain A: Q.242
- Chain B: F.103, N.136
- Chain C: D.196
Ligand excluded by PLIPGOL.9: 6 residues within 4Å:- Chain C: D.40, M.59, K.97, F.249, V.250, G.251
Ligand excluded by PLIPGOL.11: 4 residues within 4Å:- Chain A: F.103, N.136
- Chain D: D.196
- Chain F: Q.242
Ligand excluded by PLIPGOL.12: 6 residues within 4Å:- Chain D: D.40, M.59, K.97, F.249, V.250, G.251
Ligand excluded by PLIPGOL.14: 6 residues within 4Å:- Chain E: D.40, M.59, K.97, F.249, V.250, G.251
Ligand excluded by PLIPGOL.15: 4 residues within 4Å:- Chain E: D.196
- Chain G: Q.242
- Chain H: F.103, N.136
Ligand excluded by PLIPGOL.17: 6 residues within 4Å:- Chain F: D.40, M.59, K.97, F.249, V.250, G.251
Ligand excluded by PLIPGOL.18: 4 residues within 4Å:- Chain D: Q.242
- Chain F: D.196
- Chain G: F.103, N.136
Ligand excluded by PLIPGOL.20: 4 residues within 4Å:- Chain E: Q.242
- Chain F: F.103, N.136
- Chain G: D.196
Ligand excluded by PLIPGOL.21: 6 residues within 4Å:- Chain G: D.40, M.59, K.97, F.249, V.250, G.251
Ligand excluded by PLIPGOL.23: 4 residues within 4Å:- Chain E: F.103, N.136
- Chain H: D.196
- Chain J: Q.242
Ligand excluded by PLIPGOL.24: 6 residues within 4Å:- Chain H: D.40, M.59, K.97, F.249, V.250, G.251
Ligand excluded by PLIPGOL.26: 6 residues within 4Å:- Chain I: D.40, M.59, K.97, F.249, V.250, G.251
Ligand excluded by PLIPGOL.27: 4 residues within 4Å:- Chain I: D.196
- Chain K: Q.242
- Chain L: F.103, N.136
Ligand excluded by PLIPGOL.29: 6 residues within 4Å:- Chain J: D.40, M.59, K.97, F.249, V.250, G.251
Ligand excluded by PLIPGOL.30: 4 residues within 4Å:- Chain H: Q.242
- Chain J: D.196
- Chain K: F.103, N.136
Ligand excluded by PLIPGOL.32: 4 residues within 4Å:- Chain I: Q.242
- Chain J: F.103, N.136
- Chain K: D.196
Ligand excluded by PLIPGOL.33: 6 residues within 4Å:- Chain K: D.40, M.59, K.97, F.249, V.250, G.251
Ligand excluded by PLIPGOL.35: 4 residues within 4Å:- Chain B: Q.242
- Chain I: F.103, N.136
- Chain L: D.196
Ligand excluded by PLIPGOL.36: 6 residues within 4Å:- Chain L: D.40, M.59, K.97, F.249, V.250, G.251
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rodrigues, M.J. et al., Lysine relay mechanism coordinates intermediate transfer in vitamin B6 biosynthesis. Nat. Chem. Biol. (2017)
- Release Date
- 2017-01-18
- Peptides
- Pyridoxal 5'-phosphate synthase subunit PDX1.3: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
AF
BG
CH
DI
AJ
BK
CL
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.61 Å
- Oligo State
- homo-12-mer
- Ligands
- 12 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)
- 24 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rodrigues, M.J. et al., Lysine relay mechanism coordinates intermediate transfer in vitamin B6 biosynthesis. Nat. Chem. Biol. (2017)
- Release Date
- 2017-01-18
- Peptides
- Pyridoxal 5'-phosphate synthase subunit PDX1.3: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
AF
BG
CH
DI
AJ
BK
CL
D