SMTL ID : 5lqv.1

Spatial structure of the lentil lipid transfer protein in complex with anionic lysolipid LPPG

Coordinates

PDB Format

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x PGM: 1-MYRISTOYL-2-HYDROXY-SN-GLYCERO-3-[PHOSPHO-RAC-(1-GLYCEROL)](Non-covalent)

PGM.1: 19 residues within 4Å: Chain A: T.8, L.11, L.15, L.18, L.35, L.36, A.48, C.49, L.52, K.53, A.55, A.56, S.58, I.59, L.62, A.67, P.71, I.82, T.84 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.15, A:L.35, A:L.36, A:L.52, A:A.56, A:I.59, A:A.67, A:I.82 Hydrogen bonds: A:S.58, A:S.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shenkarev, Z.O. et al., Ligand Binding Properties of the Lentil Lipid Transfer Protein: Molecular Insight into the Possible Mechanism of Lipid Uptake. Biochemistry (2017)

Release Date

2017-06-28

Peptides

Non-specific lipid-transfer protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Non-specific lipid-transfer protein 2

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