SMTL ID : 5m0z.1

Cyclohexanone Monooxygenase from T. municipale: reduced enzyme bound to NADP+

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 36 residues within 4Å: Chain A: I.14, G.15, G.17, F.18, G.19, F.38, E.39, K.40, G.46, T.47, W.48, W.50, N.51, Y.53, K.57, S.58, D.59, T.60, Y.65, T.110, E.111, V.112, A.142, L.143, G.144, L.146, S.147, F.382, N.388, M.392, L.428, T.435, N.436, L.437, I.441 Ligands: NA7.2 32 PLIP interactions: 32 interactions with chain A Hydrophobic interactions: A:T.47, A:W.48, A:F.382 Hydrogen bonds: A:G.17, A:F.18, A:G.19, A:K.40, A:T.47, A:T.47, A:W.50, A:D.59, A:T.60, A:T.60, A:T.60, A:Y.65, A:Y.65, A:V.112, A:V.112, A:R.329, A:L.437 Water bridges: A:G.20, A:K.40, A:G.46, A:G.46, A:T.47, A:E.111, A:E.111, A:G.144, A:L.145, A:L.146 pi-Cation interactions: A:K.40, A:R.329

1 x NA7: [(2R,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3-HYDROXY-4-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL [(2R,3S,4S)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE(Non-covalent)

NA7.2: 18 residues within 4Å: Chain A: L.146, P.152, I.184, G.185, T.186, G.187, S.188, T.189, R.209, T.210, R.329, L.350, A.379, T.380, G.381, F.382, W.492 Ligands: FAD.1 35 PLIP interactions: 35 interactions with chain A Hydrogen bonds: A:T.186, A:T.186, A:G.187, A:T.189, A:T.189, A:G.190, A:R.209, A:T.210, A:T.210, A:T.210, A:R.329, A:G.381, A:W.492 Water bridges: A:N.150, A:T.167, A:S.188, A:S.188, A:T.189, A:R.209, A:R.209, A:R.209, A:Q.212, A:Q.212, A:Q.212, A:Q.212, A:R.329, A:R.329, A:A.379, A:F.382, A:F.382, A:W.492, A:N.497 Salt bridges: A:R.209 pi-Cation interactions: A:R.209, A:R.209

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 3 residues within 4Å: Chain A: G.162, R.163, L.164 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.163, A:L.164, A:L.164 GOL.4: 5 residues within 4Å: Chain A: R.36, F.38, Q.107, T.128, E.132 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.36, A:Q.107 Water bridges: A:T.128, A:E.132, A:E.132, A:E.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Romero, E. et al., Characterization and Crystal Structure of a Robust Cyclohexanone Monooxygenase. Angew. Chem. Int. Ed. Engl. (2016)

Release Date

2016-12-07

Peptides

Cyclohexanone Monooxygenase from Thermocrispum municipale.: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cyclohexanone Monooxygenase from Thermocrispum municipale.

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