SMTL ID : 5mdx.1

Cryo-EM structure of the PSII supercomplex from Arabidopsis thaliana

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-12-2-mer
Ligands
2 x FE2: FE (II) ION(Non-covalent)
212 x CLA: CHLOROPHYLL A(Non-covalent)(Covalent)
4 x PHO: PHEOPHYTIN A(Non-covalent)
2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
96 x CHL: CHLOROPHYLL B(Non-covalent)(Covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
van Bezouwen, L.S. et al., Subunit and chlorophyll organization of the plant photosystem II supercomplex. Nat Plants (2017)
Release Date
2017-06-21
Peptides
Photosystem II protein D1: AQ
Photosystem II CP47 reaction center protein: BR
Photosystem II CP43 reaction center protein: C5
Photosystem II D2 protein: DS
Cytochrome b559 subunit alpha: ET
Cytochrome b559 subunit beta (PsbF): FU
Photosystem II reaction center protein H: GV
Photosystem II reaction center protein I: HW
Photosystem II reaction center protein K: IX
Photosystem II reaction center protein L: JY
Photosystem II reaction center protein M: KZ
Oxygen-evolving enhancer protein 1-1, chloroplastic: L0
Photosystem II reaction center protein T: M4
Photosystem II reaction center W protein, chloroplastic: N3
Photosystem II reaction center protein X: O1
Photosystem II reaction center protein Z: P2
Chlorophyll a-b binding protein CP29.1, chloroplastic: 6b
Chlorophyll a-b binding protein CP26, chloroplastic: 7c
Chlorophyll a-b binding protein 1, chloroplastic: 89adefghiklm
Chlorophyll a-b binding protein, chloroplastic: jn
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
Q
a
B
B
R
b
C
C
5
c
D
D
S
d
E
E
T
e
F
F
U
f
G
H
V
h
H
I
W
i
I
K
X
k
J
L
Y
l
K
M
Z
m
L
O
0
o
M
T
4
t
N
W
3
w
O
X
1
x
P
Z
2
z
6
R
b
r
7
S
c
s
8
G
9
N
a
Y
d
g
e
n
f
y
g
1
h
2
i
3
k
5
l
6
m
7
j
4
n
8
Membrane
We predict this structure to be a membrane protein.

Photosystem II protein D1

Photosystem II CP47 reaction center protein

Toggle Identical (BR)

Photosystem II CP43 reaction center protein

Toggle Identical (C5)

Photosystem II D2 protein

Toggle Identical (DS)

Cytochrome b559 subunit alpha

Toggle Identical (ET)

Cytochrome b559 subunit beta (PsbF)

Toggle Identical (FU)

Photosystem II reaction center protein H

Toggle Identical (GV)

Photosystem II reaction center protein I

Toggle Identical (HW)

Photosystem II reaction center protein K

Toggle Identical (IX)

Photosystem II reaction center protein L

Toggle Identical (JY)

Photosystem II reaction center protein M

Toggle Identical (KZ)

Oxygen-evolving enhancer protein 1-1, chloroplastic

Toggle Identical (L0)

Photosystem II reaction center protein T

Toggle Identical (M4)

Photosystem II reaction center W protein, chloroplastic

Toggle Identical (N3)

Photosystem II reaction center protein X

Toggle Identical (O1)

Photosystem II reaction center protein Z

Toggle Identical (P2)

Chlorophyll a-b binding protein CP29.1, chloroplastic

Toggle Identical (6b)

Chlorophyll a-b binding protein CP26, chloroplastic

Toggle Identical (7c)

Chlorophyll a-b binding protein 1, chloroplastic

Toggle Identical (89adefghiklm)

Chlorophyll a-b binding protein, chloroplastic

Toggle Identical (jn)

Related Entries With Identical Sequence

3jcu.1 | 7oui.1