SMTL ID : 5mg8.1 (1 other biounit)

Crystal structure of the S.pombe Smc5/6 hinge domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

hetero-oligomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.242, R.274 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.242, A:R.274 SO4.2: 2 residues within 4Å: Chain A: R.264, R.270 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.264, A:R.270 SO4.4: 2 residues within 4Å: Chain A: R.332 Chain B: R.28 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Salt bridges: A:R.332, B:R.28

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: D.93, K.163, Y.164 Chain B: Y.256, K.271 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Water bridges: A:E.92 Hydrogen bonds: B:K.271, B:K.271 GOL.5: 2 residues within 4Å: Chain B: D.207, D.208 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alt, A. et al., Specialized interfaces of Smc5/6 control hinge stability and DNA association. Nat Commun (2017)

Release Date

2017-02-08

Peptides

Structural maintenance of chromosomes protein 5: A
Structural maintenance of chromosomes protein 6: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Structural maintenance of chromosomes protein 5

Structural maintenance of chromosomes protein 6

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