SMTL ID : 5mh3.1 (7 other biounits)

Crystal structure of a DM9 domain containing protein from Crassostrea gigas with K43A mutation

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: E.38, F.55, A.56, G.57, K.114, H.116, Y.123, E.130 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:E.38, A:A.56, A:G.57, A:K.114, A:K.114 Water bridges: A:E.38, A:E.130, A:E.130 GOL.2: 6 residues within 4Å: Chain B: F.55, A.56, K.114, H.116, Y.123, E.130 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:A.56, B:K.114, B:H.116, B:E.130 Water bridges: B:G.57, B:E.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jiang, S. et al., DM9 Domain Containing Protein Functions As a Pattern Recognition Receptor with Broad Microbial Recognition Spectrum. Front Immunol (2017)

Release Date

2017-12-27

Peptides

Natterin-3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Natterin-3

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