SMTL ID : 5mnv.1 (8 other biounits)

Structural and functional characterization of OleP in complex with 6DEB in PEG

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.97 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 24 residues within 4Å: Chain A: V.93, L.94, H.101, R.105, L.241, A.244, G.245, T.248, S.249, Q.252, L.290, F.296, R.298, F.321, A.348, F.349, G.350, A.353, H.354, C.356, I.357, G.358, L.361 Ligands: DEB.2 13 PLIP interactions: 12 interactions with chain A, 1 Ligand-Water interactions, Hydrophobic interactions: A:L.94, A:L.241, A:Q.252, A:L.290, A:I.357 Hydrogen bonds: A:F.296 Salt bridges: A:H.101, A:R.105, A:R.298, A:H.354 pi-Stacking: A:F.349 Metal complexes: A:C.356, H2O.1

1 x DEB: 6-DEOXYERYTHRONOLIDE B(Non-covalent)

DEB.2: 11 residues within 4Å: Chain A: M.83, F.84, L.94, I.243, A.244, V.291, G.294, S.295, L.396, I.397 Ligands: HEM.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:M.83, A:F.84, A:A.244, A:V.291, A:L.396, A:L.396, A:I.397

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Parisi, G. et al., Substrate-induced conformational change in cytochrome P450 OleP. FASEB J. (2019)

Release Date

2018-02-28

Peptides

Cytochrome P-450: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P-450

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