SMTL ID : 5mpx.1

Crystal structure of Arabidopsis thaliana RNA editing factor MORF1, space group P2(1)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

homo-tetramer

Ligands

7 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: D.11, Y.12, N.13, H.14 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.11, A:N.13, A:N.13, A:H.14 Salt bridges: A:H.14 SO4.2: 5 residues within 4Å: Chain A: L.82, P.83, G.84 Chain D: G.1, A.2 4 PLIP interactions: 3 interactions with chain D, 1 interactions with chain A Hydrogen bonds: D:A.2, A:G.84 Water bridges: D:M.3, D:M.3 SO4.3: 6 residues within 4Å: Chain B: K.23, P.83, G.84 Chain C: G.1, A.2, M.3 4 PLIP interactions: 2 interactions with chain C, 2 interactions with chain B Hydrogen bonds: C:A.2, C:M.3, B:G.84 Salt bridges: B:K.23 SO4.4: 5 residues within 4Å: Chain B: G.1, A.2 Chain C: K.23, P.83, G.84 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain C Hydrogen bonds: B:A.2, C:G.84 Water bridges: B:M.3, B:T.4 Salt bridges: C:K.23 SO4.5: 4 residues within 4Å: Chain C: D.11, Y.12, N.13, H.14 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:N.13, C:N.13, C:H.14 Water bridges: C:D.11, C:H.14, C:Y.101, C:Y.101 Salt bridges: C:H.14 SO4.6: 4 residues within 4Å: Chain A: G.1, A.2 Chain D: P.83, G.84 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain D Hydrogen bonds: A:A.2, D:G.84 Water bridges: A:G.1, A:M.3, A:M.3 SO4.7: 3 residues within 4Å: Chain D: D.11, N.13, H.14 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:N.13, D:N.13 Water bridges: D:H.14 Salt bridges: D:H.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Haag, S. et al., Crystal structures of the Arabidopsis thaliana organellar RNA editing factors MORF1 and MORF9. Nucleic Acids Res. (2017)

Release Date

2017-02-22

Peptides

Multiple organellar RNA editing factor 1, mitochondrial: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Multiple organellar RNA editing factor 1, mitochondrial

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