SMTL ID : 5mq6.1

Polycyclic Ketone Monooxygenase from the Thermophilic Fungus Thermothelomyces thermophila

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 34 residues within 4Å: Chain A: L.84, G.85, G.87, Y.88, G.89, G.90, D.113, A.114, G.120, T.121, W.122, W.124, N.125, C.132, D.133, V.134, Y.139, S.181, N.182, V.183, A.222, S.223, G.224, L.226, T.227, R.426, Y.478, T.492, V.494, A.539, N.540, N.541, L.545 Ligands: NDP.2 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:T.121, A:W.122, A:L.226, A:Y.478 Hydrogen bonds: A:G.87, A:G.89, A:G.90, A:D.113, A:A.114, A:T.121, A:T.121, A:W.124, A:D.133, A:V.134, A:Y.139, A:V.183, A:R.426, A:T.492, A:N.541, A:N.541 Water bridges: A:Y.88, A:Y.88, A:D.113, A:G.120, A:G.224, A:I.225, A:I.225, A:T.227 pi-Cation interactions: A:R.426

1 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.2: 22 residues within 4Å: Chain A: F.42, L.226, P.232, I.275, G.276, T.277, G.278, A.279, T.280, F.298, R.300, T.301, K.425, R.426, G.451, V.452, S.475, T.476, G.477, Y.478, Y.600 Ligands: FAD.1 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:T.277, A:T.277, A:A.279, A:T.280, A:T.280, A:R.300, A:R.300, A:V.452, A:Y.600 Water bridges: A:Q.230, A:T.247, A:G.278, A:T.301, A:S.475, A:S.475, A:G.477, A:Y.478, A:Y.478 Salt bridges: A:R.300, A:K.425

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 8 residues within 4Å: Chain A: Y.26, H.395, A.396, V.399, R.400, A.418, Y.420, T.422 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Y.26, A:R.400, A:A.418, A:Y.420, A:T.422 Water bridges: A:V.399, A:A.418

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Furst, M.J. et al., Polycyclic Ketone Monooxygenase from the Thermophilic Fungus Thermothelomyces thermophila: A Structurally Distinct Biocatalyst for Bulky Substrates. J. Am. Chem. Soc. (2017)

Release Date

2017-01-11

Peptides

Pyridine nucleotide-disulfide oxidoreductase-like protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pyridine nucleotide-disulfide oxidoreductase-like protein