SMTL ID : 5mui.1

Glycoside hydrolase BT_0996

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.77 Å

Oligo State

monomer

Ligands

1 x RAM- 8OQ- GAL- ARA- RAM- FUB- RAM- 8PK: beta-L-arabinofuranose-(1-2)-alpha-L-rhamnopyranose-(1-2)-[alpha-L-rhamnopyranose-(1-3)]alpha-L-arabinopyranose-(1-4)-[4-O-[(1R)-1-hydroxyethyl]-2-O-methyl-alpha-L-fucopyranose-(1-2)]beta-D-galactopyranose-(1-2)-alpha-D-aceric acid-(1-3)-alpha-L-rhamnopyranose

RAM-8OQ-GAL-ARA-RAM-FUB-RAM-8PK.1: 23 residues within 4Å: Chain A: D.61, C.62, G.84, Y.158, E.159, A.160, V.161, L.203, Y.206, K.207, N.227, G.229, K.238, Q.240, I.270, D.273, F.288, A.290, F.291, F.331, H.333, K.334, R.357 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:A.160 Hydrogen bonds: A:Y.206, A:K.207, A:N.227, A:Q.240, A:Q.240, A:D.273, A:K.334, A:Q.240 Water bridges: A:Q.240

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ndeh, D. et al., Complex pectin metabolism by gut bacteria reveals novel catalytic functions. Nature (2017)

Release Date

2017-03-22

Peptides

Beta-galactosidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-galactosidase