SMTL ID : 5mus.1

Structure of the C-terminal domain of a reptarenavirus L protein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

homo-dimer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: S.53, G.54, L.55, M.56, Q.200, G.201 Chain B: D.156 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:L.55, A:Q.200, A:G.201 Water bridges: A:K.110, A:K.110 GOL.2: 3 residues within 4Å: Chain A: H.140, L.141, F.166 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.140, A:L.141 GOL.3: 7 residues within 4Å: Chain B: H.262, K.263, E.268, L.271, F.287, H.288, H.289 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.263, B:E.268

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 5 residues within 4Å: Chain A: L.326, E.327 Chain B: H.288, K.290, K.291 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rosenthal, M. et al., Structural insights into reptarenavirus cap-snatching machinery. PLoS Pathog. (2017)

Release Date

2017-05-17

Peptides

L protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

L protein

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