SMTL ID : 5mvz.1 (1 other biounit)

Fab 4AB007 bound to Interleukin-1-beta

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

hetero-1-1-1-mer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: G.186, H.188, T.207 Chain B: N.157, N.158, D.187 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:N.157, B:N.157, B:N.158, B:D.187, A:T.207 Water bridges: A:G.186 GOL.2: 5 residues within 4Å: Chain B: F.103, K.123, I.126, E.185, Q.186 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.186 GOL.3: 4 residues within 4Å: Chain B: P.35, G.36, L.98, P.100 1 PLIP interactions: 1 interactions with chain B Water bridges: B:L.98 GOL.4: 2 residues within 4Å: Chain B: R.128, D.190 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.128, B:R.128, B:D.190 Water bridges: B:D.190

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stark, W. et al., Structure of a novel, fully Human Fab binding to Interleukin 1-beta. To Be Published

Release Date

2017-02-15

Peptides

Fab 4AB007 H-chain: A
Fab 4AB007 L-chain: B
Interleukin-1 beta: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
U

Fab 4AB007 H-chain

Fab 4AB007 L-chain

Interleukin-1 beta

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