SMTL ID : 5n71.1

CRYSTAL STRUCTURE OF MATURE CATHEPSIN D FROM THE TICK IXODES RICINUS (IRCD1)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.94, K.99 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.94 Salt bridges: A:R.94, A:K.99

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 5 residues within 4Å: Chain A: Y.196, I.225, N.227, T.230, I.313 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.227, A:T.230

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hanova, I. et al., Novel Structural Mechanism of Allosteric Regulation of Aspartic Peptidases via an Evolutionarily Conserved Exosite. Cell Chem Biol (2018)

Release Date

2017-12-27

Peptides

Putative cathepsin d: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative cathepsin d

Related Entries With Identical Sequence