SMTL ID : 5nfj.3 (2 other biounits)

Crystal structure of the methyltransferase subunit of human mitochondrial Ribonuclease P (MRPP1) bound to S-adenosyl-methionine (SAM)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

monomer

Ligands

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 20 residues within 4Å: Chain A: L.89, T.90, A.91, I.108, G.109, F.111, D.113, Q.117, P.118, G.119, T.120, S.121, E.133, C.134, L.135, L.137, K.148, N.149, L.150, M.155 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:G.109, A:Q.117, A:Q.117, A:G.119, A:T.120, A:S.121, A:S.121, A:L.135, A:K.148, A:L.150 Water bridges: A:T.90, A:A.91, A:L.122, A:L.122, A:N.149 Salt bridges: A:D.113

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: T.99, F.100, L.162, G.166, N.167, W.168 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:F.100, A:W.168, A:W.168

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oerum, S. et al., Crystal structure of the methyltransferase subunit of human mitochondrial Ribonuclease P (MRPP1) bound to S-adenosyl-methionine (SAM). To Be Published

Release Date

2018-05-16

Peptides

Mitochondrial ribonuclease P protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Mitochondrial ribonuclease P protein 1

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