SMTL ID : 5nfy.3 (3 other biounits)

SARS-CoV nsp10/nsp14 dynamic complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.38 Å

Oligo State

hetero-1-1-mer

Ligands

5 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.214, C.215, C.217, C.233, H.236 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.214, A:C.217, A:C.233, A:H.236 ZN.2: 4 residues within 4Å: Chain A: H.264, C.268, H.271, C.286 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.264, A:C.268, A:H.271, A:C.286 ZN.3: 5 residues within 4Å: Chain A: C.459, T.482, C.484, C.491, H.494 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.459, A:T.482, A:C.491, A:H.494 ZN.5: 4 residues within 4Å: Chain B: C.81, C.84, H.90, C.97 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.81, B:C.84, B:H.90, B:C.97 ZN.6: 4 residues within 4Å: Chain B: C.124, C.127, C.135, C.137 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:C.124, B:C.127

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 1 residues within 4Å: Chain A: L.216 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ferron, F. et al., Structural and molecular basis of mismatch correction and ribavirin excision from coronavirus RNA. Proc. Natl. Acad. Sci. U.S.A. (2018)

Release Date

2018-01-10

Peptides

Polyprotein 1ab: A
Polyprotein 1ab: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
P

Polyprotein 1ab

Polyprotein 1ab

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