SMTL ID : 5ngj.1

Crystal structure of pb6, major tail tube protein of bacteriophage T5

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

5 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: A.97, L.131, A.132, Q.151, I.152 Ligand excluded by PLIP CL.2: 9 residues within 4Å: Chain A: S.99, S.100, T.110, G.111, N.122, F.123, K.124, D.125, N.126 Ligand excluded by PLIP CL.3: 3 residues within 4Å: Chain A: V.387, T.388, T.389 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain A: N.391, G.463, G.464 Ligand excluded by PLIP CL.5: 2 residues within 4Å: Chain A: R.102, A.103 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arnaud, C.A. et al., Bacteriophage T5 tail tube structure suggests a trigger mechanism for Siphoviridae DNA ejection. Nat Commun (2017)

Release Date

2018-01-03

Peptides

Tail tube protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Tail tube protein