SMTL ID : 5nl9.1

Crystal structure of a peroxide stress regulator from Leptospira interrogans

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.42, D.90, H.96, H.98, D.109 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.42, A:D.90, A:H.96, A:H.98, A:D.109 ZN.3: 5 residues within 4Å: Chain B: H.96, H.98, D.109 Ligands: UNX.4, UNX.5 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.96, B:H.98, B:D.109, H2O.4

1 x K: POTASSIUM ION(Non-covalent)

K.2: 6 residues within 4Å: Chain A: E.102, K.146, K.148 Chain B: N.78, N.138, N.140 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:N.138

2 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.4: 4 residues within 4Å: Chain B: H.98, D.109 Ligands: ZN.3, UNX.5 No protein-ligand interaction detected (PLIP) UNX.5: 4 residues within 4Å: Chain B: H.96, H.98 Ligands: ZN.3, UNX.4 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kebouchi, M. et al., Structure and function of the Leptospira interrogans peroxide stress regulator (PerR), an atypical PerR devoid of a structural metal-binding site. J. Biol. Chem. (2018)

Release Date

2017-11-22

Peptides

Transcriptional regulator (FUR family): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transcriptional regulator (FUR family)