SMTL ID : 5nmd.2 (1 other biounit)

868 TCR Specific for HLA A02 presenting HIV Epitope SLYNTVATL

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

hetero-1-1-mer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: Q.5, N.6, L.10, L.20, N.21, T.104 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.6, A:N.21

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: R.59, K.79 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.59, A:R.59 Salt bridges: A:R.59, A:K.79 SO4.3: 3 residues within 4Å: Chain B: G.161, H.205, R.207 5 PLIP interactions: 5 interactions with chain B Water bridges: B:G.161, B:G.161, B:R.207 Salt bridges: B:H.205, B:R.207 SO4.4: 4 residues within 4Å: Chain B: E.163, V.164, H.165, S.166 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:H.165, B:S.166 Salt bridges: B:H.165

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cole, D.K. et al., Dual Molecular Mechanisms Govern Escape at Immunodominant HLA A2-Restricted HIV Epitope. Front Immunol (2017)

Release Date

2017-11-15

Peptides

human T-cell Receptor alpha chain: A
Human T-cell Receptor, beta chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

human T-cell Receptor alpha chain

Human T-cell Receptor, beta chain

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