SMTL ID : 5o0f.1

Crystal structure of Phosphopantetheine adenylyltransferase from Mycobacterium abcessus in complex with 3-(indol-3-yl)propanoic acid (Fragment 5)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-hexamer

Ligands

4 x IOP: INDOLYLPROPIONIC ACID(Non-covalent)

IOP.1: 10 residues within 4Å: Chain B: P.8, G.9, A.35, L.37, G.70, Q.71, G.72, L.74, F.77, K.88 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:P.8, B:A.35, B:L.37, B:L.37, B:F.77 Hydrogen bonds: B:G.72 Water bridges: B:L.74 Salt bridges: B:K.88 IOP.2: 10 residues within 4Å: Chain C: P.8, G.9, A.35, L.37, G.70, Q.71, G.72, L.74, F.77, K.88 7 PLIP interactions: 7 interactions with chain C Hydrophobic interactions: C:A.35, C:L.37, C:F.77 Hydrogen bonds: C:G.72 Water bridges: C:L.74, C:K.88 Salt bridges: C:K.88 IOP.3: 10 residues within 4Å: Chain E: P.8, G.9, A.35, L.37, G.70, Q.71, G.72, L.74, F.77, K.88 8 PLIP interactions: 8 interactions with chain E Hydrophobic interactions: E:P.8, E:A.35, E:L.37, E:L.37, E:F.77 Hydrogen bonds: E:G.72 Water bridges: E:L.74 Salt bridges: E:K.88 IOP.4: 10 residues within 4Å: Chain F: P.8, G.9, A.35, L.37, G.70, Q.71, G.72, L.74, F.77, K.88 7 PLIP interactions: 7 interactions with chain F Hydrophobic interactions: F:A.35, F:L.37, F:F.77 Hydrogen bonds: F:G.72 Water bridges: F:L.74, F:K.88 Salt bridges: F:K.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thomas, S.E. et al., Structural Biology and the Design of New Therapeutics: From HIV and Cancer to Mycobacterial Infections: A Paper Dedicated to John Kendrew. J. Mol. Biol. (2017)

Release Date

2017-06-28

Peptides

Phosphopantetheine adenylyltransferase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

Phosphopantetheine adenylyltransferase

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