SMTL ID : 5o5s.1

X-ray crystal structure of the RapZ C-terminal domain from Escherichia coli

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.17 Å

Oligo State

homo-dimer

Ligands

2 x MLI: MALONATE ION(Non-functional Binders)

MLI.1: 7 residues within 4Å: Chain A: N.35, H.37, C.94, T.95, G.96, H.99, R.100 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:H.37 Hydrogen bonds: A:T.95, A:T.95, A:G.96 Water bridges: A:T.95, A:H.99, A:H.99, A:H.99, A:H.99, A:H.99, A:H.99, A:R.100 Salt bridges: A:H.37, A:H.99, A:R.100 MLI.2: 7 residues within 4Å: Chain B: N.35, H.37, C.94, T.95, G.96, H.99, R.100 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:H.37 Hydrogen bonds: B:T.95, B:G.96 Water bridges: B:T.95, B:H.99, B:H.99, B:H.99, B:R.100 Salt bridges: B:H.37, B:H.99, B:R.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gonzalez, G.M. et al., Structural insights into RapZ-mediated regulation of bacterial amino-sugar metabolism. Nucleic Acids Res. (2017)

Release Date

2017-08-30

Peptides

RNase adapter protein RapZ: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

RNase adapter protein RapZ