SMTL ID : 5o76.2 (1 other biounit)

Structure of phosphoY371 c-CBL in complex with ZAP70-peptide and UbV.pCBL ubiquitin variant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.47 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.337, C.340, N.343, C.357, C.360 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.337, A:C.340, A:C.357, A:C.360 ZN.2: 4 residues within 4Å: Chain A: C.352, H.354, C.372, C.375 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.352, A:H.354, A:C.372

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 6 residues within 4Å: Chain A: D.185, T.187, N.189, Y.191, I.192, E.196 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.185, A:T.187, A:Y.191, A:E.196, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gabrielsen, M. et al., A General Strategy for Discovery of Inhibitors and Activators of RING and U-box E3 Ligases with Ubiquitin Variants. Mol. Cell (2017)

Release Date

2017-11-01

Peptides

E3 ubiquitin-protein ligase CBL: A
Tyrosine protein kinase ZAP70 peptide: B
UbV.pCBL ubiquitin variant: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
F

E3 ubiquitin-protein ligase CBL

Tyrosine protein kinase ZAP70 peptide

UbV.pCBL ubiquitin variant

Related Entries With Identical Sequence