SMTL ID : 5o7d.1

The X-ray structure of human R38M phosphoglycerate kinase 1 mutant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.84 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 16 residues within 4Å: Chain A: G.214, A.215, K.216, D.219, K.220, G.238, G.239, F.242, L.257, F.292, G.313, L.314, G.341, V.342, E.344, D.375 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:A.215, A:K.216, A:D.219, A:G.239, A:G.313, A:E.344, A:D.375 Salt bridges: A:K.220, A:K.220

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fiorillo, A. et al., The phosphoglycerate kinase 1 variants found in carcinoma cells display different catalytic activity and conformational stability compared to the native enzyme. PLoS ONE (2018)

Release Date

2018-06-20

Peptides

Phosphoglycerate kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphoglycerate kinase 1