SMTL ID : 5oc1.1

Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x ANN: 4-METHOXYBENZOIC ACID(Non-covalent)

ANN.1: 11 residues within 4Å: Chain A: Y.91, I.356, I.390, S.392, F.396, T.412, I.499, F.500, H.501, H.545 Ligands: FAD.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.356, A:F.396, A:I.499, A:I.499 Hydrogen bonds: A:S.392 Salt bridges: A:H.501, A:H.545 pi-Stacking: A:Y.91

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.2: 39 residues within 4Å: Chain A: V.7, G.8, G.10, N.11, A.12, L.31, E.32, A.33, V.53, W.60, P.78, R.79, G.80, R.81, M.82, G.84, G.85, S.86, S.87, H.90, Y.91, M.92, V.93, A.228, Q.229, V.230, S.270, A.271, G.272, F.500, H.501, D.534, G.535, H.545, T.546, Q.547, I.550 Ligands: ANN.1, GOL.5 28 PLIP interactions: 28 interactions with chain A Hydrophobic interactions: A:V.53, A:H.90, A:F.500, A:F.500 Hydrogen bonds: A:N.11, A:A.12, A:A.33, A:R.79, A:G.80, A:S.86, A:S.86, A:Y.91, A:V.93, A:V.93, A:V.230, A:V.230, A:F.500, A:G.535, A:T.546, A:T.546, A:Q.547 Water bridges: A:G.10, A:G.13, A:Q.229, A:G.548 pi-Stacking: A:Y.91 pi-Cation interactions: A:H.90, A:H.501

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: F.160, N.324, Q.325, T.326, E.336, P.351 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.326 GOL.4: 8 residues within 4Å: Chain A: Y.62, Q.229, I.278, L.282, L.426, P.431, D.433, P.435 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Y.62, A:D.433 Water bridges: A:Q.229, A:V.230, A:T.428, A:N.430, A:D.433, A:D.433 GOL.5: 9 residues within 4Å: Chain A: R.79, G.272, S.273, H.501, P.502, G.535, T.546, I.550 Ligands: FAD.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.79, A:S.86, A:S.86, A:S.273, A:G.535, A:T.546 Water bridges: A:V.274 GOL.6: 10 residues within 4Å: Chain A: E.141, P.183, D.184, M.185, G.186, S.194, W.195, S.196, I.197, L.360 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.141, A:D.184, A:M.185, A:G.186, A:W.195 Water bridges: A:I.197 GOL.7: 5 residues within 4Å: Chain A: P.50, Y.91, F.396, H.397, P.398 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.91, A:Y.91, A:H.397 Water bridges: A:W.395, A:H.397

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Carro, J. et al., Protein dynamics promote hydride tunnelling in substrate oxidation by aryl-alcohol oxidase. Phys Chem Chem Phys (2017)

Release Date

2017-11-01

Peptides

Aryl-alcohol oxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Aryl-alcohol oxidase