SMTL ID : 5oh7.1 (2 other biounits)

Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Imidazolidine-2,4-dione (Hydantoin)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.25, C.28, C.91, C.94 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.25, A:C.28, A:C.91, A:C.94

1 x HYN: imidazolidine-2,4-dione(Non-covalent)

HYN.2: 8 residues within 4Å: Chain A: N.51, P.52, F.78, S.79, W.80, W.86, W.100, Y.102 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:F.78, A:W.80, A:Y.102 Water bridges: A:N.51 pi-Stacking: A:W.80, A:W.86, A:W.86, A:W.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boichenko, I. et al., Chemical Ligand Space of Cereblon. Acs Omega (2018)

Release Date

2018-10-10

Peptides

Cereblon isoform 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cereblon isoform 4

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