SMTL ID : 5orb.1

Crystal Structure of BAZ2B bromodomain in complex with 1-methyl-cyclopentapyrazole compound 30

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x JR6: 2-(4-methoxyphenyl)sulfanyl-~{N}-(2-methyl-5,6-dihydro-4~{H}-cyclopenta[c]pyrazol-3-yl)ethanamide(Non-covalent)

JR6.1: 7 residues within 4Å: Chain A: W.32, P.33, F.34, V.38, F.88, N.89, I.95 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.88, A:I.95 Hydrogen bonds: A:P.33, A:N.89 Water bridges: A:N.39

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 1 residues within 4Å: Chain A: K.52 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Marchand, J.R. et al., Discovery of Inhibitors of Four Bromodomains by Fragment-Anchored Ligand Docking. J Chem Inf Model (2017)

Release Date

2017-09-13

Peptides

Bromodomain adjacent to zinc finger domain protein 2B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2B

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