SMTL ID : 5pgm.1 (1 other biounit)

SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

homo-tetramer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: H.8, Q.10, S.11, N.14, T.20, R.59 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.11, A:S.11, A:N.14, A:T.20, A:T.20 Water bridges: A:R.59, A:R.59 Salt bridges: A:H.8 SO4.2: 4 residues within 4Å: Chain A: R.87, Y.89, R.113, R.114 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.87, A:Y.89 Water bridges: A:E.86, A:E.86, A:R.114 Salt bridges: A:K.97, A:R.113, A:R.114 SO4.3: 6 residues within 4Å: Chain B: H.8, Q.10, S.11, N.14, T.20, R.59 17 PLIP interactions: 17 interactions with chain B Hydrogen bonds: B:S.11, B:S.11, B:N.14, B:N.14, B:T.20 Water bridges: B:R.7, B:G.9, B:T.20, B:T.20, B:T.20, B:T.20, B:E.86, B:E.86, B:E.86, B:H.181 Salt bridges: B:H.8, B:R.59 SO4.4: 5 residues within 4Å: Chain B: F.19, Y.89, K.97, R.113, R.114 14 PLIP interactions: 14 interactions with chain B Water bridges: B:T.20, B:E.86, B:E.86, B:E.86, B:E.86, B:E.86, B:R.87, B:K.97, B:K.97, B:K.97, B:K.97 Salt bridges: B:K.97, B:R.113, B:R.114 SO4.5: 6 residues within 4Å: Chain C: H.8, Q.10, S.11, N.14, T.20, R.59 12 PLIP interactions: 12 interactions with chain C Hydrogen bonds: C:S.11, C:S.11, C:N.14, C:N.14, C:T.20, C:R.59 Water bridges: C:R.7, C:H.8, C:T.20, C:T.20, C:T.20 Salt bridges: C:H.8 SO4.6: 6 residues within 4Å: Chain C: F.19, R.87, Y.89, R.113, R.114, N.183 17 PLIP interactions: 17 interactions with chain C Hydrogen bonds: C:R.87, C:N.183 Water bridges: C:T.20, C:E.86, C:E.86, C:R.87, C:K.97, C:K.97, C:K.97, C:K.97, C:K.97, C:R.113, C:R.113, C:R.114, C:R.114 Salt bridges: C:R.113, C:R.114 SO4.7: 6 residues within 4Å: Chain D: H.8, Q.10, S.11, N.14, T.20, R.59 13 PLIP interactions: 13 interactions with chain D Hydrogen bonds: D:S.11, D:S.11, D:N.14, D:N.14, D:T.20, D:T.20 Water bridges: D:G.9, D:T.20, D:T.20, D:T.20, D:R.59 Salt bridges: D:H.8, D:R.59 SO4.8: 5 residues within 4Å: Chain D: F.19, Y.89, K.97, R.113, R.114 8 PLIP interactions: 8 interactions with chain D Hydrogen bonds: D:Y.89, D:R.114 Water bridges: D:T.20, D:K.97, D:K.97, D:R.114 Salt bridges: D:K.97, D:R.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rigden, D.J. et al., Sulphate ions observed in the 2.12 A structure of a new crystal form of S. cerevisiae phosphoglycerate mutase provide insights into understanding the catalytic mechanism. J.Mol.Biol. (1999)

Release Date

1999-02-16

Peptides

PHOSPHOGLYCERATE MUTASE 1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
C

C
A

D
B

PHOSPHOGLYCERATE MUTASE 1

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