SMTL ID : 5std.5 (4 other biounits)

SCYTALONE DEHYDRATASE PLUS INHIBITOR 2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-hexamer

Ligands

6 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: E.155, D.156, E.159 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.155, A:D.156, A:E.159 CA.3: 5 residues within 4Å: Chain B: E.155, D.156 Chain E: E.155, D.156 Ligands: CA.9 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain E Metal complexes: B:E.155, B:D.156, E:E.155, E:D.156, E:D.156 CA.5: 2 residues within 4Å: Chain C: R.43, D.47 3 PLIP interactions: 2 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:R.43, C:D.47, H2O.9 CA.7: 3 residues within 4Å: Chain D: E.155, D.156, E.159 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:E.155, D:D.156, D:E.159 CA.9: 5 residues within 4Å: Chain B: E.155, D.156 Chain E: E.155, D.156 Ligands: CA.3 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain E Metal complexes: B:E.155, B:D.156, B:D.156, E:E.155, E:D.156 CA.11: 2 residues within 4Å: Chain F: R.43, D.47 3 PLIP interactions: 2 interactions with chain F, 1 Ligand-Water interactions Metal complexes: F:R.43, F:D.47, H2O.18

6 x UNN: (6,7-DIFLUORO-QUINAZOLIN-4-YL)-(1-METHYL-2,2-DIPHENYL-ETHYL)-AMINE(Non-covalent)

UNN.2: 15 residues within 4Å: Chain A: W.18, Y.42, F.45, M.61, V.67, L.98, V.100, H.102, A.119, S.121, N.123, L.139, P.141, I.143, F.150 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.42, A:F.45, A:F.45, A:V.67, A:V.67, A:L.98, A:P.141, A:I.143 Hydrogen bonds: A:N.123 Water bridges: A:H.77 pi-Stacking: A:Y.42, A:F.45, A:F.154 UNN.4: 18 residues within 4Å: Chain B: W.18, Y.22, Y.42, F.45, M.61, V.62, V.67, L.68, L.98, V.100, H.102, A.119, S.121, N.123, L.139, P.141, I.143, F.150 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:Y.22, B:Y.42, B:F.45, B:V.62, B:V.67, B:V.67, B:L.68, B:L.98, B:P.141, B:I.143, B:F.150 Hydrogen bonds: B:H.77, B:N.123 pi-Stacking: B:Y.42, B:F.45, B:F.154 UNN.6: 17 residues within 4Å: Chain C: W.18, Y.22, Y.42, F.45, M.61, V.67, L.98, V.100, H.102, A.119, S.121, N.123, L.139, P.141, I.143, F.150, F.154 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:Y.22, C:Y.42, C:F.45, C:F.45, C:V.67, C:V.67, C:L.98, C:P.141, C:I.143 Hydrogen bonds: C:H.77, C:N.123 pi-Stacking: C:Y.42, C:F.45, C:F.154 UNN.8: 15 residues within 4Å: Chain D: W.18, Y.42, F.45, M.61, V.67, L.98, V.100, H.102, A.119, S.121, N.123, L.139, P.141, I.143, F.150 13 PLIP interactions: 13 interactions with chain D Hydrophobic interactions: D:Y.42, D:F.45, D:F.45, D:V.67, D:V.67, D:L.98, D:P.141, D:I.143 Hydrogen bonds: D:N.123 Water bridges: D:H.77 pi-Stacking: D:Y.42, D:F.45, D:F.154 UNN.10: 18 residues within 4Å: Chain E: W.18, Y.22, Y.42, F.45, M.61, V.62, V.67, L.68, L.98, V.100, H.102, A.119, S.121, N.123, L.139, P.141, I.143, F.150 16 PLIP interactions: 16 interactions with chain E Hydrophobic interactions: E:Y.22, E:Y.42, E:F.45, E:V.62, E:V.67, E:V.67, E:L.68, E:L.98, E:P.141, E:I.143, E:F.150 Hydrogen bonds: E:H.77, E:N.123 pi-Stacking: E:Y.42, E:F.45, E:F.154 UNN.12: 17 residues within 4Å: Chain F: W.18, Y.22, Y.42, F.45, M.61, V.67, L.98, V.100, H.102, A.119, S.121, N.123, L.139, P.141, I.143, F.150, F.154 15 PLIP interactions: 15 interactions with chain F Hydrophobic interactions: F:Y.22, F:Y.42, F:F.45, F:F.45, F:V.67, F:V.67, F:L.98, F:P.141, F:I.143 Hydrogen bonds: F:H.77, F:N.123 Water bridges: F:Y.42 pi-Stacking: F:Y.42, F:F.45, F:F.154

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wawrzak, Z. et al., High-resolution structures of scytalone dehydratase-inhibitor complexes crystallized at physiological pH. Proteins (1999)

Release Date

1999-12-29

Peptides

Scytalone dehydratase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

Scytalone dehydratase

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