SMTL ID : 5suv.1

Crystal structure of holo-[acyl-carrier-protein] synthase (AcpS) from Neisseria meningitidis in complex with Coenzyme A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-trimer

Ligands

3 x COA: COENZYME A(Non-covalent)

COA.1: 23 residues within 4Å: Chain A: D.9, R.15, F.27, R.30, I.31, F.54, E.58, A.61, K.62, G.65, T.66, G.67, I.68, F.74 Chain B: K.52, H.81, L.84, G.85, K.86, P.87, M.111, S.112, D.113 16 PLIP interactions: 9 interactions with chain B, 7 interactions with chain A Hydrogen bonds: B:S.112, B:S.112, B:D.113, A:R.15, A:G.65, A:G.67, A:I.68 Water bridges: B:K.52, B:K.52, B:S.110, B:D.113, A:R.15 Salt bridges: B:K.52, B:H.81, A:K.62, A:K.62 COA.2: 24 residues within 4Å: Chain B: D.9, R.15, L.19, F.23, F.27, I.31, F.54, E.58, A.61, K.62, G.65, T.66, G.67, I.68, F.74 Chain C: K.52, H.81, L.84, G.85, K.86, P.87, M.111, S.112, D.113 19 PLIP interactions: 10 interactions with chain B, 9 interactions with chain C Hydrophobic interactions: B:E.58, B:I.68, B:F.74 Hydrogen bonds: B:E.58, B:I.68, C:L.84, C:S.112, C:S.112, C:D.113 Water bridges: B:D.9, B:R.15, B:E.58, C:R.53, C:S.110, C:S.112 Salt bridges: B:K.62, B:K.62, C:K.52, C:H.81 COA.3: 23 residues within 4Å: Chain A: K.52, H.81, L.84, G.85, K.86, P.87, M.111, S.112, D.113 Chain C: D.9, L.19, F.27, R.30, I.31, F.54, E.58, A.61, K.62, G.65, T.66, G.67, I.68, F.74 11 PLIP interactions: 6 interactions with chain C, 5 interactions with chain A Hydrophobic interactions: C:F.74 Hydrogen bonds: C:E.58, C:G.65, C:I.68, A:S.112, A:S.112 Salt bridges: C:K.62, C:K.62, A:K.52, A:H.81 Water bridges: A:S.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nanson, J.D. et al., Crystal structure of holo-[acyl-carrier-protein] synthase (AcpS) from Neisseria meningitidis in complex with Coenzyme A. To Be Published

Release Date

2017-09-13

Peptides

Holo-[acyl-carrier-protein] synthase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Holo-[acyl-carrier-protein] synthase