SMTL ID : 5t20.7 (7 other biounits)

Crystal Structure of Tarin Lectin bound to Trimannose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.91 Å

Oligo State

hetero-1-1-mer

Ligands

2 x MAN- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose

MAN-MAN-MAN.1: 7 residues within 4Å: Chain A: Q.28, N.29, D.30, N.32, Y.36, Q.41, A.45 4 PLIP interactions: 4 interactions with chain A Water bridges: A:N.37, A:N.39, A:N.39, A:Q.41 MAN-MAN-MAN.2: 11 residues within 4Å: Chain B: Q.31, D.33, N.35, V.37, L.38, Y.39, Y.43, G.44, W.45, Q.46, H.50 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:L.38, B:Y.43

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 2 residues within 4Å: Chain A: K.19, G.21 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.21 Water bridges: A:K.19, A:K.19, A:N.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pereira, P.R. et al., High-resolution crystal structures of Colocasia esculenta tarin lectin. Glycobiology (2017)

Release Date

2016-09-14

Peptides

Lectin: A
Lectin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
O

B
P

Lectin

Lectin

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