SMTL ID : 5t4m.1 (1 other biounit)

Crystal Structure of Human Protocadherin-15 EC3-5

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.24 Å

Oligo State

monomer

Ligands

5 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: E.129, N.131, D.173 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.129, A:D.173, H2O.3, H2O.4, H2O.4 CA.2: 5 residues within 4Å: Chain A: N.130, Q.132, D.171, D.173, D.226 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:Q.132, A:D.171, A:D.173, A:D.226, H2O.4 CA.3: 6 residues within 4Å: Chain A: E.147, D.211, E.213, D.245, N.246 Ligands: CA.4 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.147, A:D.211, A:E.213, H2O.2, H2O.4 CA.4: 8 residues within 4Å: Chain A: E.147, E.213, D.242, A.243, D.245, N.246, D.278 Ligands: CA.3 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.147, A:D.242, A:A.243, A:D.245, A:D.278 CA.5: 6 residues within 4Å: Chain A: N.244, N.246, D.276, D.278, N.282, D.328 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.246, A:D.276, A:D.278, A:N.282, A:D.328

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Powers, R.E. et al., A Partial Calcium-Free Linker Confers Flexibility to Inner-Ear Protocadherin-15. Structure (2017)

Release Date

2017-02-22

Peptides

Protocadherin-15: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protocadherin-15

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