This service may be intermittently unavailable between 18th May 08:00 and 19th May 24:00 due to network maintenance by IT-Services, University of Basel.

SMTL ID : 5t62.1

Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 3.30 Å
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
160 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
2 x K: POTASSIUM ION(Non-functional Binders)
1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Malyutin, A.G. et al., Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis. EMBO J. (2017)
Release Date
2017-02-08
Peptides
Eukaryotic translation initiation factor 6: A
60S ribosomal protein L2-A: E
60S ribosomal protein L3: F
60S ribosomal protein L4-A: G
60S ribosomal protein L5: H
60S ribosomal protein L6-A: I
60S ribosomal protein L7-A: J
60S ribosomal protein L8-A: K
60S ribosomal protein L9-A: L
60S ribosomal protein L10: M
60S ribosomal protein L11-A: N
60S ribosomal protein L13-A: O
60S ribosomal protein L14-A: P
60S ribosomal protein L15-A: Q
60S ribosomal protein L16-A: R
60S ribosomal protein L17-A: S
60S ribosomal protein L18-A: T
60S ribosomal protein L19-A: U
60S ribosomal protein L20-A: V
60S ribosomal protein L21-A: W
60S ribosomal protein L22-A: X
60S ribosomal protein L23-A: Y
60S ribosomal protein L24-A: Z
60S ribosomal protein L25: 0
60S ribosomal protein L26-A: 1
60S ribosomal protein L27-A: 2
60S ribosomal protein L28: 3
60S ribosomal protein L29: 4
60S ribosomal protein L30: 5
60S ribosomal protein L31-A: 6
60S ribosomal protein L32: 7
60S ribosomal protein L33-A: 8
60S ribosomal protein L34-A: 9
60S ribosomal protein L35-A: a
60S ribosomal protein L36-A: b
60S ribosomal protein L37-A: c
60S ribosomal protein L38: d
60S ribosomal protein L39: e
Ubiquitin-60S ribosomal protein L40: f
60S ribosomal protein L42-A: g
60S ribosomal protein L43-A: h
Ribosomal Protein uL1: i
60S ribosomal export protein NMD3: j
Large subunit GTPase 1: k
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
X
E
D
F
E
G
F
H
G
I
H
J
I
K
J
L
K
M
L
N
M
O
N
P
O
Q
a
R
b
S
c
T
d
U
e
V
f
W
g
X
h
Y
i
Z
j
0
k
1
l
2
m
3
n
4
o
5
p
6
q
7
r
8
s
9
t
a
u
b
v
c
w
d
x
e
y
f
z
g
Q
h
R
i
S
j
V
k
W

Eukaryotic translation initiation factor 6

60S ribosomal protein L2-A

60S ribosomal protein L3

60S ribosomal protein L4-A

60S ribosomal protein L5

60S ribosomal protein L6-A

60S ribosomal protein L7-A

60S ribosomal protein L8-A

60S ribosomal protein L9-A

60S ribosomal protein L10

60S ribosomal protein L11-A

60S ribosomal protein L13-A

60S ribosomal protein L14-A

60S ribosomal protein L15-A

60S ribosomal protein L16-A

60S ribosomal protein L17-A

60S ribosomal protein L18-A

60S ribosomal protein L19-A

60S ribosomal protein L20-A

60S ribosomal protein L21-A

60S ribosomal protein L22-A

60S ribosomal protein L23-A

60S ribosomal protein L24-A

60S ribosomal protein L25

60S ribosomal protein L26-A

60S ribosomal protein L27-A

60S ribosomal protein L28

60S ribosomal protein L29

60S ribosomal protein L30

60S ribosomal protein L31-A

60S ribosomal protein L32

60S ribosomal protein L33-A

60S ribosomal protein L34-A

60S ribosomal protein L35-A

60S ribosomal protein L36-A

60S ribosomal protein L37-A

60S ribosomal protein L38

60S ribosomal protein L39

Ubiquitin-60S ribosomal protein L40

60S ribosomal protein L42-A

60S ribosomal protein L43-A

Ribosomal Protein uL1

60S ribosomal export protein NMD3

Large subunit GTPase 1

Related Entries With Identical Sequence

1qtj.1 | 1t0k.1 | 2ww9.1 | 2wwa.1 | 2wwb.1 | 3j16.1 | 3j6x.2 | 3j6x.3 | 3j6x.4 | 3j6x.5 | 3j6x.6 | 3j6x.7 | 3j6x.8 | 3j6x.9 | 3j6x.10 | 3j6x.11 | 3j6x.12 | 3j6x.13 | 3j6x.14 | 3j6x.15 | 3j6x.16 | 3j6x.17 | 3j6x.18 | 3j6x.19 | 3j6x.20 | 3j6x.21 | 3j6x.22 | 3j6x.23 | 3j6x.24 | 3j6x.25  more...