SMTL ID : 5t8q.1 (1 other biounit)

Crystal structure of murine NF-kappaB inducing kinase (NIK) bound to aryl pyrrole fragment 17

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.63 Å

Oligo State

monomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.311, K.312, E.313, H.316 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.312, A:E.313 Salt bridges: A:R.311 SO4.2: 5 residues within 4Å: Chain A: H.78, V.82, R.84, R.92 Ligands: 76Y.6 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:H.78, A:R.84, A:R.92 SO4.3: 9 residues within 4Å: Chain A: C.120, V.129, P.130, L.131, M.145, L.208, C.209, D.210, F.211 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.129, A:D.210, A:F.211 SO4.4: 3 residues within 4Å: Chain A: L.58, T.59, E.60 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.59, A:T.59, A:E.60 Salt bridges: A:K.61 SO4.5: 2 residues within 4Å: Chain A: R.324, R.325 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.324, A:R.325

1 x 76Y: 1-[(2-chlorophenyl)methyl]pyrrole-2-carboxamide(Non-covalent)

76Y.6: 12 residues within 4Å: Chain A: R.84, V.90, H.91, R.92, A.103, M.145, E.146, L.147, L.148, G.151, L.198 Ligands: SO4.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.90, A:V.90, A:R.92, A:L.147, A:L.198, A:L.198 Hydrogen bonds: A:E.146, A:L.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Castanedo, G.M. et al., Structure-Based Design of Tricyclic NF-kappa B Inducing Kinase (NIK) Inhibitors That Have High Selectivity over Phosphoinositide-3-kinase (PI3K). J. Med. Chem. (2017)

Release Date

2017-01-11

Peptides

Mitogen-activated protein kinase kinase kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase kinase kinase 14

Related Entries With Identical Sequence