SMTL ID : 5tdu.1

Toluene 4-monooxygenase (T4moHD) bound to product after turnover in crystal

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

hetero-2-2-2-2-mer

Ligands

4 x FE: FE (III) ION(Non-covalent)

FE.1: 5 residues within 4Å: Chain A: E.104, E.134, H.137 Ligands: FE.2, PCR.3 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.104, A:E.134, A:H.137, H2O.1, H2O.3 FE.2: 6 residues within 4Å: Chain A: E.134, E.197, E.231, H.234 Ligands: FE.1, PCR.3 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.134, A:E.197, A:E.231, A:H.234, H2O.1 FE.4: 5 residues within 4Å: Chain E: E.104, E.134, H.137 Ligands: FE.5, PCR.6 5 PLIP interactions: 3 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:E.104, E:E.134, E:H.137, H2O.36, H2O.38 FE.5: 6 residues within 4Å: Chain E: E.134, E.197, E.231, H.234 Ligands: FE.4, PCR.6 5 PLIP interactions: 4 interactions with chain E, 1 Ligand-Water interactions Metal complexes: E:E.134, E:E.197, E:E.231, E:H.234, H2O.36

2 x PCR: P-CRESOL(Non-covalent)

PCR.3: 14 residues within 4Å: Chain A: I.100, G.103, E.104, A.107, E.134, H.137, F.176, I.180, F.196, E.197, F.205, E.231 Ligands: FE.1, FE.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.100, A:A.107, A:F.176 Hydrogen bonds: A:E.134 Water bridges: A:T.201 pi-Stacking: A:F.196 PCR.6: 14 residues within 4Å: Chain E: I.100, G.103, E.104, A.107, E.134, H.137, F.176, I.180, F.196, E.197, F.205, E.231 Ligands: FE.4, FE.5 5 PLIP interactions: 5 interactions with chain E Hydrophobic interactions: E:I.100, E:A.107, E:F.176 Hydrogen bonds: E:E.134 pi-Stacking: E:F.196

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Acheson, J.F. et al., In-crystal reaction cycle of a toluene-bound diiron hydroxylase. Nature (2017)

Release Date

2017-03-22

Peptides

Toluene-4-monooxygenase system protein A: AE
Toluene-4-monooxygenase system protein E: BF
Toluene-4-monooxygenase system protein B: CG
Toluene-4-monooxygenase system protein D: DH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
A

B
B

F
B

C
C

G
C

D
E

H
E

Toluene-4-monooxygenase system protein A

Toluene-4-monooxygenase system protein E

Toluene-4-monooxygenase system protein B

Toluene-4-monooxygenase system protein D

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