SMTL ID : 5tfr.2 (1 other biounit)

Crystal structure of Zika Virus NS5 protein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.05 Å

Oligo State

monomer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 18 residues within 4Å: Chain A: S.60, G.62, G.85, C.86, G.87, G.89, G.90, W.91, T.108, K.109, H.114, E.115, V.134, D.135, V.136, F.137, D.150, I.151 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:S.60, A:G.89, A:G.90, A:W.91, A:W.91, A:T.108, A:K.109, A:E.115, A:D.135, A:V.136

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: E.443, H.447, C.452, H.453, C.455 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.443, A:H.447, A:C.452, A:C.455 ZN.3: 5 residues within 4Å: Chain A: H.718, N.720, C.734, L.845, C.853 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.718, A:C.734, A:C.853

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Upadhyay, A.K. et al., Crystal structure of full-length Zika virus NS5 protein reveals a conformation similar to Japanese encephalitis virus NS5. Acta Crystallogr F Struct Biol Commun (2017)

Release Date

2016-10-12

Peptides

Genome polyprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Genome polyprotein

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