SMTL ID : 5tip.1 (3 other biounits)

The Structure of the Major Capsid protein of PBCV-1

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.00 Å
Oligo State
homo-trimer
Ligands
6 x BGC- FUC- XYP- RM4- 7CV- XXR- MAN- GLA- XYP: 6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose-(1-2)-beta-L-rhamnopyranose-(1-4)-beta-D-xylopyranose-(1-4)-[alpha-D-mannopyranose-(1-3)-alpha-D-rhamnopyranose-(1-3)][alpha-D-galactopyranose-(1-2)]alpha-L-fucopyranose-(1-3)-[beta-D-xylopyranose-(1-4)]beta-D-glucopyranose
3 x BGC- FUC- XXR- MAN- GLA- XYP- XYP: alpha-D-mannopyranose-(1-3)-alpha-D-rhamnopyranose-(1-3)-[alpha-D-galactopyranose-(1-2)][beta-D-xylopyranose-(1-4)]alpha-L-fucopyranose-(1-3)-[beta-D-xylopyranose-(1-4)]beta-D-glucopyranose
3 x BGC- FUC: alpha-L-fucopyranose-(1-3)-beta-D-glucopyranose(Post Translational Modification)
3 x HG: MERCURY (II) ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
De Castro, C. et al., Structure of the chlorovirus PBCV-1 major capsid glycoprotein determined by combining crystallographic and carbohydrate molecular modeling approaches. Proc. Natl. Acad. Sci. U.S.A. (2018)
Release Date
2017-10-18
Peptides
Major capsid protein: ABC
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
C
A

Major capsid protein

Toggle Identical (ABC)

Related Entries With Identical Sequence

5tip.2 | 5tip.3 | 5tip.4 | 5tiq.1 | 5tiq.2