SMTL ID : 5tl4.1 (3 other biounits)

Crystal structure of Sphingomonas paucimobilis aryl O-demethylase LigM

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 1 residues within 4Å: Chain A: R.126 Ligand excluded by PLIP

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: N.85, K.96 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.85, A:K.96 Water bridges: A:S.86

1 x NH4: AMMONIUM ION(Non-functional Binders)

NH4.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 7 residues within 4Å: Chain A: S.295, F.296, V.297, A.383, L.385, V.391, L.426 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.297 Water bridges: A:V.297, A:G.389

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kohler, A.C. et al., Structure of aryl O-demethylase offers molecular insight into a catalytic tyrosine-dependent mechanism. Proc. Natl. Acad. Sci. U.S.A. (2017)

Release Date

2017-04-12

Peptides

Vanillate/3-O-methylgallate O-demethylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Vanillate/3-O-methylgallate O-demethylase

Related Entries With Identical Sequence