SMTL ID : 5tmp.1 (2 other biounits)

COMPLEX OF E. COLI THYMIDYLATE KINASE WITH THE BISUBSTRATE INHIBITOR AZTP5A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

monomer

Ligands

1 x Z5A: P1-(5'-ADENOSYL)P5-(5'-(3'AZIDO-3'-DEOXYTHYMIDYL))PENTAPHOSPHATE(Non-covalent)

Z5A.1: 25 residues within 4Å: Chain A: E.12, G.13, A.14, G.15, K.16, T.17, E.40, P.41, R.51, L.55, F.74, R.78, D.99, R.100, S.104, T.105, Y.108, Q.109, R.149, R.153, D.157, I.159, E.160, F.167, L.193 34 PLIP interactions: 34 interactions with chain A Hydrophobic interactions: A:E.40, A:Y.108 Hydrogen bonds: A:G.13, A:A.14, A:G.15, A:G.15, A:K.16, A:T.17, A:T.17, A:E.40, A:R.78, A:D.99, A:Q.109, A:Q.109, A:I.159 Water bridges: A:E.12, A:R.51, A:R.51, A:R.51, A:R.100, A:R.100 Salt bridges: A:K.16, A:K.16, A:K.16, A:K.16, A:K.16, A:R.51, A:R.51, A:R.100, A:R.153, A:R.153, A:R.153 pi-Stacking: A:F.74 pi-Cation interactions: A:R.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lavie, A. et al., Structural basis for efficient phosphorylation of 3'-azidothymidine monophosphate by Escherichia coli thymidylate kinase. Proc.Natl.Acad.Sci.USA (1998)

Release Date

1998-11-25

Peptides

PROTEIN (THYMIDYLATE KINASE): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN (THYMIDYLATE KINASE)

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