- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.40 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x ZN: ZINC ION(Non-covalent)
- 4 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.2: 15 residues within 4Å:- Chain A: L.320, P.346, T.347, G.348, S.349, G.350, K.351, T.352, V.353, E.377, L.473, R.524, G.526, Y.528
- Ligands: MG.3
14 PLIP interactions:14 interactions with chain A- Hydrogen bonds: A:R.306, A:G.348, A:S.349, A:G.350, A:K.351, A:T.352, A:T.352, A:T.352, A:V.353, A:R.524, A:G.526, A:Y.528, A:Y.528
- Salt bridges: A:K.351
ADP.5: 14 residues within 4Å:- Chain B: Q.314, L.320, P.346, T.347, G.348, S.349, G.350, K.351, T.352, V.353, L.473, R.524, G.526
- Ligands: MG.6
12 PLIP interactions:12 interactions with chain B- Hydrogen bonds: B:Q.314, B:L.320, B:T.347, B:G.348, B:S.349, B:G.350, B:K.351, B:T.352, B:V.353, B:R.524, B:G.526
- Salt bridges: B:K.351
ADP.10: 15 residues within 4Å:- Chain D: L.320, P.346, T.347, G.348, S.349, G.350, K.351, T.352, V.353, E.377, L.473, R.524, G.526, Y.528
- Ligands: MG.11
13 PLIP interactions:13 interactions with chain D- Hydrogen bonds: D:R.306, D:G.348, D:S.349, D:G.350, D:K.351, D:T.352, D:T.352, D:T.352, D:V.353, D:R.524, D:G.526, D:Y.528
- Salt bridges: D:K.351
ADP.13: 14 residues within 4Å:- Chain E: Q.314, L.320, P.346, T.347, G.348, S.349, G.350, K.351, T.352, V.353, L.473, R.524, G.526
- Ligands: MG.14
12 PLIP interactions:12 interactions with chain E- Hydrogen bonds: E:Q.314, E:L.320, E:G.348, E:S.349, E:G.350, E:K.351, E:T.352, E:T.352, E:V.353, E:R.524, E:G.526
- Salt bridges: E:K.351
- 4 x MG: MAGNESIUM ION(Non-covalent)
MG.3: 3 residues within 4Å:- Chain A: T.352, E.377
- Ligands: ADP.2
1 PLIP interactions:1 interactions with chain A- Metal complexes: A:T.352
MG.6: 2 residues within 4Å:- Chain B: T.352
- Ligands: ADP.5
1 PLIP interactions:1 interactions with chain B- Metal complexes: B:T.352
MG.11: 3 residues within 4Å:- Chain D: T.352, E.377
- Ligands: ADP.10
1 PLIP interactions:1 interactions with chain D- Metal complexes: D:T.352
MG.14: 2 residues within 4Å:- Chain E: T.352
- Ligands: ADP.13
1 PLIP interactions:1 interactions with chain E- Metal complexes: E:T.352
- 2 x FMT: FORMIC ACID(Non-functional Binders)
FMT.8: 7 residues within 4Å:- Chain C: P.346, T.347, G.348, S.349, G.350, K.351, T.352
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:G.348, C:S.349, C:G.350, C:K.351, C:K.351, C:T.352, C:T.352
FMT.16: 7 residues within 4Å:- Chain F: P.346, T.347, G.348, S.349, G.350, K.351, T.352
7 PLIP interactions:7 interactions with chain F- Hydrogen bonds: F:G.348, F:S.349, F:G.350, F:K.351, F:K.351, F:T.352, F:T.352
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- McCallum, M. et al., The molecular mechanism of the type IVa pilus motors. Nat Commun (2017)
- Release Date
- 2017-05-17
- Peptides
- Type IV pilus biogenesis ATPase PilB: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
CC
DD
BE
CF
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.40 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x ZN: ZINC ION(Non-covalent)
- 4 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 2 x FMT: FORMIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- McCallum, M. et al., The molecular mechanism of the type IVa pilus motors. Nat Commun (2017)
- Release Date
- 2017-05-17
- Peptides
- Type IV pilus biogenesis ATPase PilB: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
CC
DD
BE
CF
D