SMTL ID : 5u28.1

BRD4 first bromodomain (BD1) in complex with dual PI3 kinase inhibitor SF2523

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x 82V: 3-(2,3-dihydro-1,4-benzodioxin-6-yl)-5-(morpholin-4-yl)-7H-thieno[3,2-b]pyran-7-one(Non-covalent)

82V.1: 11 residues within 4Å: Chain A: W.39, P.40, F.41, Q.43, V.45, L.50, L.52, N.98, I.104 Ligands: PEG.2, SCN.3 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:W.39, A:P.40, A:L.50, A:L.50, A:L.52, A:I.104 Hydrogen bonds: A:N.98 Water bridges: A:Q.43

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 4 residues within 4Å: Chain A: W.39, Q.42, Q.43 Ligands: 82V.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.43

1 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.3: 3 residues within 4Å: Chain A: I.104, M.107 Ligands: 82V.1 1 PLIP interactions: 1 interactions with chain A Water bridges: A:I.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Andrews, F.H. et al., Dual-activity PI3K-BRD4 inhibitor for the orthogonal inhibition of MYC to block tumor growth and metastasis. Proc. Natl. Acad. Sci. U.S.A. (2017)

Release Date

2017-02-08

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4