- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Covalent)
- 3 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 7 residues within 4Å:- Chain A: D.69, L.70, E.71, D.98, T.145
- Chain B: K.252
- Ligands: GTP.1
3 PLIP interactions:3 interactions with chain A- Metal complexes: A:D.69, A:E.71, A:E.71
MG.5: 7 residues within 4Å:- Chain C: D.69, L.70, E.71, D.98, T.145
- Chain D: K.252
- Ligands: GTP.4
3 PLIP interactions:3 interactions with chain C- Metal complexes: C:D.69, C:E.71, C:E.71
MG.8: 7 residues within 4Å:- Chain E: D.69, L.70, E.71, D.98, T.145
- Chain F: K.252
- Ligands: GTP.7
3 PLIP interactions:3 interactions with chain E- Metal complexes: E:D.69, E:E.71, E:E.71
- 3 x GDP: GUANOSINE-5'-DIPHOSPHATE(Covalent)
GDP.3: 19 residues within 4Å:- Chain B: G.10, Q.11, C.12, G.13, Q.15, N.99, S.138, G.142, T.143, G.144, S.145, V.169, D.203, N.204, L.207, Y.222, L.225, N.226
- Chain C: L.248
16 PLIP interactions:16 interactions with chain B- Hydrogen bonds: B:G.10, B:Q.11, B:Q.11, B:C.12, B:N.99, B:S.138, B:G.142, B:T.143, B:T.143, B:G.144, B:N.204, B:Y.222, B:Y.222, B:N.226, B:N.226
- pi-Stacking: B:Y.222
GDP.6: 18 residues within 4Å:- Chain D: G.10, Q.11, C.12, G.13, Q.15, N.99, S.138, G.142, T.143, G.144, S.145, V.169, D.203, N.204, L.207, Y.222, L.225, N.226
16 PLIP interactions:16 interactions with chain D- Hydrogen bonds: D:G.10, D:Q.11, D:Q.11, D:C.12, D:N.99, D:S.138, D:G.142, D:T.143, D:T.143, D:G.144, D:N.204, D:Y.222, D:Y.222, D:N.226, D:N.226
- pi-Stacking: D:Y.222
GDP.9: 19 residues within 4Å:- Chain A: L.248
- Chain F: G.10, Q.11, C.12, G.13, Q.15, N.99, S.138, G.142, T.143, G.144, S.145, V.169, D.203, N.204, L.207, Y.222, L.225, N.226
16 PLIP interactions:16 interactions with chain F- Hydrogen bonds: F:G.10, F:Q.11, F:Q.11, F:C.12, F:N.99, F:S.138, F:G.142, F:T.143, F:T.143, F:G.144, F:N.204, F:Y.222, F:Y.222, F:N.226, F:N.226
- pi-Stacking: F:Y.222
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ichikawa, M. et al., Subnanometre-resolution structure of the doublet microtubule reveals new classes of microtubule-associated proteins. Nat Commun (2017)
- Release Date
- 2017-05-10
- Peptides
- Tubulin alpha chain: ACE
Tubulin beta chain: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CC
EE
AB
DD
FF
B
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Covalent)
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 3 x GDP: GUANOSINE-5'-DIPHOSPHATE(Covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ichikawa, M. et al., Subnanometre-resolution structure of the doublet microtubule reveals new classes of microtubule-associated proteins. Nat Commun (2017)
- Release Date
- 2017-05-10
- Peptides
- Tubulin alpha chain: ACE
Tubulin beta chain: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CC
EE
AB
DD
FF
B