- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.44 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NA: SODIUM ION(Non-functional Binders)
NA.1: 9 residues within 4Å:- Chain A: Q.47, H.80, D.82, H.83, M.102, E.132, H.210, K.251, N.253
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:E.132, A:H.210, A:K.251, A:N.253
NA.5: 9 residues within 4Å:- Chain B: Q.47, H.80, D.82, H.83, M.102, E.132, H.210, K.251, N.253
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:H.80, B:D.82, B:D.82, B:H.210, B:K.251, B:N.253
- 4 x ZN: ZINC ION(Non-covalent)
ZN.2: 5 residues within 4Å:- Chain A: H.83, E.134, Q.180, H.210
- Ligands: ZN.3
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:H.83, A:E.134, A:E.134, A:H.210, H2O.3
ZN.3: 4 residues within 4Å:- Chain A: H.83, D.104, E.134
- Ligands: ZN.2
5 PLIP interactions:2 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:H.83, A:D.104, H2O.3, H2O.6, H2O.10
ZN.6: 5 residues within 4Å:- Chain B: H.83, E.134, Q.180, H.210
- Ligands: ZN.7
5 PLIP interactions:4 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:H.83, B:E.134, B:E.134, B:H.210, H2O.21
ZN.7: 4 residues within 4Å:- Chain B: H.83, D.104, E.134
- Ligands: ZN.6
5 PLIP interactions:2 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:D.104, B:E.134, H2O.21, H2O.23, H2O.23
- 2 x P6F: 1,6-di-O-phosphono-D-fructose(Non-covalent)
P6F.4: 20 residues within 4Å:- Chain A: N.23, Q.47, S.49, A.52, D.82, H.83, Q.180, G.181, K.184, H.210, G.211, A.212, S.213, N.253, T.254, D.255, T.256, D.257, R.259
- Chain B: R.280
25 PLIP interactions:22 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:Q.47, A:D.82, A:H.83, A:Q.180, A:G.181, A:G.211, A:A.212, A:S.213, A:S.213, A:S.213, A:N.253, A:D.255, A:T.256, A:T.256, A:R.259
- Water bridges: A:N.23, A:G.51, A:H.83, A:D.255, A:R.259, B:R.280, B:R.280
- Salt bridges: A:K.184, A:R.259, B:R.280
P6F.8: 20 residues within 4Å:- Chain A: R.280
- Chain B: N.23, Q.47, S.49, A.52, D.82, H.83, Q.180, G.181, K.184, H.210, G.211, A.212, S.213, N.253, T.254, D.255, T.256, D.257, R.259
29 PLIP interactions:26 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:Q.47, B:S.49, B:D.82, B:H.83, B:Q.180, B:G.181, B:G.211, B:A.212, B:S.213, B:S.213, B:S.213, B:S.213, B:N.253, B:D.255, B:D.255, B:T.256, B:T.256, B:R.259
- Water bridges: B:N.23, B:G.51, B:H.83, B:H.210, B:D.255, B:R.259, A:R.280, A:R.280
- Salt bridges: B:K.184, B:R.259, A:R.280
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jacques, B. et al., Active site remodeling during the catalytic cycle in metal-dependent fructose-1,6-bisphosphate aldolases. J. Biol. Chem. (2018)
- Release Date
- 2018-04-11
- Peptides
- Fructose-bisphosphate aldolase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.44 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NA: SODIUM ION(Non-functional Binders)
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x P6F: 1,6-di-O-phosphono-D-fructose(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jacques, B. et al., Active site remodeling during the catalytic cycle in metal-dependent fructose-1,6-bisphosphate aldolases. J. Biol. Chem. (2018)
- Release Date
- 2018-04-11
- Peptides
- Fructose-bisphosphate aldolase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B