SMTL ID : 5uk7.2 (1 other biounit)

Escherichia coli Hfq bound to dsDNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-hexamer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: Y.54, H.56 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.56, H2O.1, H2O.1, H2O.1 ZN.2: 1 residues within 4Å: Chain B: H.56 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.56, H2O.1, H2O.1 ZN.3: 2 residues within 4Å: Chain C: F.41, H.56 4 PLIP interactions: 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:H.56, H2O.1, H2O.2, H2O.2 ZN.4: 2 residues within 4Å: Chain D: Y.54, H.56 3 PLIP interactions: 1 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:H.56, H2O.2, H2O.2 ZN.5: 1 residues within 4Å: Chain E: H.56 4 PLIP interactions: 1 interactions with chain E, 3 Ligand-Water interactions Metal complexes: E:H.56, H2O.2, H2O.2, H2O.2 ZN.6: 2 residues within 4Å: Chain F: Y.54, H.56 4 PLIP interactions: 1 interactions with chain F, 3 Ligand-Water interactions Metal complexes: F:H.56, H2O.3, H2O.3, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Orans, J. et al., Crystal structure of Escherichia coli Hfq DNA complex reveals multifunctional nucleic acid binding site. To Be Published

Release Date

2018-05-09

Peptides

RNA-binding protein Hfq: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

D
J

E
K

F
L

RNA-binding protein Hfq

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